HIGH PERFORMANCE COMPUTING, ALIGNMENT AND STORAGE CLUSTER (HPC) Hassle-free, and turnkey, range of high performance computing clusters for genetics labs HPC SYSTEM HIGHLIGHTS Turnkey Solution, Ready for Immediate Use The BioSoft range of HPC systems are designed to be immediately used in even the most compute-heavy genetics lab environment. Class-Leading Performance Compute hardware that matches or beats any available HPC cluster for genetics applications. Analysis Integration Supported BioSoft Integrators will integrate any 3rd party analysis package. Best Value Available Equivalant performance and support of other systems at a fraction of the price. TURNKEY COMPUTING INFRASTRUCTURE PLATFORM TABLE 1 | BioSoft HPC System Options FOUNDATION 96 CORE 128 CORE Cores 48* 96 128 RAM 128GB 256GB 512GB Raw Storage 10TB** 48TB 144TB 10GB Ethernet NO Yes Yes Head Node Cores 12 12 8 Head Node RAM 32GB 48GB 48GB 10TB*** 2TB*** 2TB*** Number of Compute Nodes 3 7 10 Compute Cores 12 12 12 Compute RAM 32GB 48GB 48GB Comput Storage 250GB 250GB 250GB Storage Node Cores 8 8 8 Storage Node RAM 128GB 128GB 128GB Head Node Storage Even the most minor interruptions of service in modern Storage Node Storage 10TB** 4x2TB 6Gbps Raid 5 w/1 Hot Spare 24x2TB 6Gbps Raid 5 w1 Hot Spare, 2xJBOD connected to NAS via SAS Cables 24x2TB 6Gbps Raid 5 w/1 Hot Spare minimize downtime by pre-configuring support for all Storage Node OS Drives 2TB*** 2TB*** 2TB*** major sequencing platforms. Your analysis pipeline will be High Speed Switch N/A 24 Port 10Gb E 24 Port 10Gb E installed and up and running in the least amount of time, General Comm Switch 10/100/1000 Base T Gigabit 24 Port GigE 24 Port GigE ensuring that you maintain productivity. KVM iKVM Network Yes Yes LCD NONE 17” 17” UPS Head Node & NAS Head Node & NAS, Switches along with monitoring card Head Node & NAS, Switches along with monitoring card PDU For compute nodes For compute nodes For compute nodes HDD, RAM Maintenance Kit Maintenance Kit 12U 15U 15U next-generation sequencing (NGS) labs represent a significant hit to productivity. The BioSoft Integrators’ HPC range of products are specifically designed to All the settings for the most common sequencers, such as Illumina, Life, PacBio, and Roche, are pre-installed, preconfigured and pre-tested on the BioSoft HPC system. This approach makes deployment of the system plug-and-play. It takes the install team only one day to deploy, setup communications with sequencer(s), and test. Spare Parts Rack Enclosure The BioSoft HPC eliminates the need for time consuming *64 Hyperthreaded cores | **Upgradable to 28TB | ***2 TB Drives Raid 1 setup and configuration of the compute infrastructure for genetics labs. More importantly, if not configured properly, BioSoft HPC, lab and Information Technology (IT) managers the computing backbone of an NGS lab becomes a choke can feel confident that the system comes ready for use, without point, severely limiting output and productivity. With the any risks of information bottlenecks. HIGH PERFORMANCE COMPUTING, ALIGNMENT AND STORAGE CLUSTER (HPC) FIGURE 1 | Compact Design HPC FIGURE 2 | Data Center Rack BioSoft Integrators’ compact, yet powerful, HPC design make it one of the most efficient solutions available. FOUNDATION HPC, IN-LAB CLUSTER DEPLOYMENT software, IT and hardware support. BioSoft also offers onsite technical training and troubleshooting. Our Foundation platform’s unique design combines both alignment and data storage in just 1U of rack space. For labs that do not already have a sequencing IT team There is no backplane or shared power supply. This allows with solid UNIX/Linux expertise, the optional Remote IT BioSoft Integrators to configure the solution that best Support from BioSoft is ideal. All your IT support needs, meets variable needs with only half the rack space. The including problem fixes, software updates and patch entire system can fit under a lab workbench, eliminating installs, and NGS required software and configuration the need for costly server room build-outs. The Foundation updates, will be handled by the BioSoft team of system’s cabinet comes with sound insulation that isolates experienced staff. 80% of fan and hard drive noise, so lab workers are not at risk. SEQUENCING PLATFORM AGNOSTIC The BioSoft HPC clusters are not limited to serving any Our green design uses 55% recyclable/reusable chassis one sequencing system. Each cluster comes ready to metal and features an industry leading 90% Plus support the following systems: Efficiency rating. • Illumina HiSeq, MiSeq, GA • Life IonTorrent, SOLiD BEST IN CLASS PERFORMANCE • PacBio RS BioSoft Integrators offers a truly unique design resulting • Roche 454 in superior performance and increases flexibility. In recent testing on competitive clusters from sequencing appliance companies, BioSoft Integrators equaled or outperformed the competition at a lower cost. With the BioSoft HPC cluster you never have to worry about falling behind as new standards are established, in sequencing. It is the only future-proofed genetics HPC solution. All three of the available configurations are truly high CUSTOM INTEGRATION OF ANALYSIS performance clusters, even the Foundation system is BioSoft Integrators will integrate any 3rd party or internally enough to keep up with the needs of a mid-sized lab. developed analysis package that a lab chooses to utilize. The ability to upgrade the number of processor cores With this service you will never have to worry about the and storage space provides the necessary flexibility and sometimes-painful task of integrating analysis software. platform evolution as needs grow. When this service is combined with the optional FULLY SUPPORTED PLATFORM LabOptimize™ LIMS, analysis runs can be automatically BioSoft Integrators offer industry-leading warranty on all initiated after an instrument run, minimizing down time HPC systems. New installs come with 30 days of Remote and the overall time to results. Lab managers can also track Assist login support, World-Wide onsite support, 7/24 samples each step of the way when using LabOptimize. HIGH PERFORMANCE COMPUTING, ALIGNMENT AND STORAGE CLUSTER (HPC) BEST VALUE AVAILABLE BioSoft HPC Clusters The performance features and benefits of BioSoft HPC Catalog No. clusters make them class-leading in most categories, HPC, Analysis and Storage Clusters including the price. However, the real benefit of the Foundation HC-100-1001 BioSoft HPC offering is the peace of mind offered by 96 Cores HC-100-1002 128 Cores HC-100-1003 Compute Node Cluster HC-201-1001 Storage Cluster Node 36TB HC-301-1001 Storage Cluster Node 72TB HC-301-1002 Storage Cluster Node 144TB HC-301-1003 Storage Cluster Node 500TB HC-301-1004 such a focused solution. • Increases productivity Focus on laboratory tasks and research. • Maximizes ROI Extend the life of your computing equipment with our proactive and regular maintenance. • On-site IT support without on-site costs BioSoft experts are on call 24/7 to remotely access Optional Remote IT your environment. 6-month Remote IT Support Contract IT-101-1001 12-month Remote IT Support Contract IT-101-1002 Additional Information To learn more about the whole line of HPC, Analysis and storage, visit www.biosoftintegrators.com. 3755 Avocado Blvd, Suite 150, La Mesa, CA 91941 p: 619-793-5095 e: [email protected] www.biosoftintegrators.com FOR RESEARCH USE ONLY. ©2013 BioSoft Integrators, Inc. All rights reserved. BioSoft, BioSoft Integrators, LabOptimize™, LabOptimize™ LIMS. All other brands and names contained herein are the property of the respective owners. Current as of 28 March 2013.
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